Showing : R update • reset
0
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4
replies
2.8k
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Biocgenerics updating problem on ubuntu 17.10
bioconductor biocgenerics ubuntu package updates r update
8.0 years ago siinemselvi • 0
3
votes
3
replies
4.1k
views
problem reinstalling Bioconductor package 'clusterProfiler' after updating R to 3.4.0
clusterprofiler package installation r update
updated 8.5 years ago by ▴ 10 • written 8.5 years ago by ▴ 10
2
votes
1
reply
5.0k
views
Upgrade to Bioconductor 3.4 - problems with R
r update upgrade bioclite
updated 9.0 years ago by 68k • written 9.0 years ago by • 0
0
votes
2
replies
2.1k
views
package ‘virtualArray’ is not available (for R version 3.2.1)
r update
updated 10.3 years ago by 25k • written 10.3 years ago by • 0
3
votes
11
replies
7.2k
views
Problems getting Bioc 3.1 after upgrade to R_3.2.0
biocinstaller r update
10.5 years ago meeta.mistry ▴ 30
3
votes
11
replies
15k
views
Problems updating Bioconductor with R 3.2.0
upgrade r update
updated 10.6 years ago by ★ 8.2k • written 10.6 years ago by ▴ 10
2
votes
2
replies
2.3k
views
R 3.1.1 - Update error
R update
updated 11.0 years ago by 68k • written 11.0 years ago by ▴ 10
7 results • Page 1 of 1
Recent ...
Replies
Answer: After running samtools, the featureCounts command crashed. by Kevin Blighe ★ 4.0k
Hi Rui Tang, The "buffer overflow detected" error in featureCounts usually stems from a corrupted or malformed GTF file, often due to tr…
Answer: Problem with the TMB plot by Kevin Blighe ★ 4.0k
Hi bioinffun, The linear TMB plot with no clustering suggests your variant calls may lack sample-specific discrimination, likely due to …
Answer: gene Set with high AUC score but no cells assigned to cell type by Kevin Blighe ★ 4.0k
Hi, You have correctly identified the issue: AUCell's automatic threshold selection is conservative by design, aiming for specificity to…
Answer: featureCounts -L: high unassigned:mapq fraction by Kevin Blighe ★ 4.0k
Hi Katarzyna, The discrepancy arises because your samtools stats were restricted to genic regions only, where alignments are typically o…
Answer: Streamlining the computing time for MiloDE p-value correction in large dataset? by Kevin Blighe ★ 4.0k
Hi Joseph, I agree with ATpoint's suggestion that pseudobulk aggregation (e.g., via aggregateData in scran or similar) would likely be f…
Votes
Answer: DESeq2 design for haplotype MPRA
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Suppress warning in RHDF5 write
Answer: Suppress warning in RHDF5 write
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